SubtiBank SubtiBank
Version comparison:

2018-02-13T06:28:11.000Z2025-05-11 04:52:28

locus

BSU18210

BSU_18210

proteinLength

595

511

geneLength

1785

1536

outlinks

bsu

BSU18210

BSU_18210

Gene

Coordinates

1,949,682 → 1,951,217

1,949,682 1,951,217

The protein

Catalyzed reaction/ biological activity

3-methylbut-2-enoyl-CoA + Biotin-CO2 --→ 3-methyl-glutaconyl-CoA + biotin [Pubmed|19935659]

3-methylbut-2-enoyl-CoA + Biotin-CO2 -- 3-methyl-glutaconyl-CoA + biotin [Pubmed|19935659]

The protein

Paralogous protein(s)

[[protein|YqjD]]

[[this]]

Biological materials

Mutant

MGNA-B081 (yngE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1080 NBRP B. subtilis, Japan]

BKE18210 (Δ[[gene|yngE]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATAATCCATCAGCATTGCCT, downstream forward: _UP4_TAAAAGCAAGAACTTAGGAG

BKK18210 (Δ[[gene|yngE]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATAATCCATCAGCATTGCCT, downstream forward: _UP4_TAAAAGCAAGAACTTAGGAG

MGNA-B081 (yngE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1080 NBRP B. subtilis, Japan]

BKE18210 ([[gene|yngE]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE18210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATAATCCATCAGCATTGCCT, downstream forward: _UP4_TAAAAGCAAGAACTTAGGAG

BKK18210 ([[gene|yngE]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK18210 BGSC], [Pubmed|28189581], upstream reverse: _UP1_ATAATCCATCAGCATTGCCT, downstream forward: _UP4_TAAAAGCAAGAACTTAGGAG

The protein

Protein family

AccD/PCCB family (with [[protein|AccD]] and [[protein|YqjD]], according to UniProt)

The protein

[SW|Domains]

CoA carboxyltransferase N-terminal domain (aa 2-254) (according to UniProt)

CoA carboxyltransferase C-terminal domain (aa 260-506) (according to UniProt)

The protein

Structure

[PDB|1VRG] (from Thermotoga maritima, 40% identity)